SubtiBank SubtiBank
ykfA [2019-06-28 10:16:44]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

ykfA [2019-06-28 10:16:44]

similar to immunity to bacteriotoxins
Locus
BSU12970
Isoelectric point
5.41
Molecular weight
25.26 kDa
Protein length
319 aa Sequence Blast
Gene length
960 bp Sequence Blast
Function
unknown
Product
unknown
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
Loading

Categories containing this gene/protein

  • Lifestyles → Coping with stress → Toxins, antitoxins and immunity against toxins/ based on similarity

    • Gene

    Coordinates
    1,365,888 → 1,366,847

    The protein

    Protein family

  • peptidase S66 family (according to Swiss-Prot)

    • Structure

  • 3SR3 (MccF from B. anthracis, 30% identity) PubMed

    • Expression and Regulation

    Operons

    Genes
    dppA-dppB-dppC-dppD-dppE-ykfA-ykfB-ykfC-ykfD
    Description
    PubMed

    Regulatory mechanism

  • CodY: repression, PubMed, in CodY regulon
    • view in new tab

    Biological materials

    Mutant

  • MGNA-A740 (ykfA::erm), available at the NBRP B. subtilis, Japan
  • BKE12970 (ΔykfA::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTTGCTCTGCACCCTACG, downstream forward: _UP4_GTTTCAGAAGGGGCGCTGAA
  • BKK12970 (ΔykfA::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTTGCTCTGCACCCTACG, downstream forward: _UP4_GTTTCAGAAGGGGCGCTGAA

    • References

    Loading